I don't think that seeing the water circulation in your tank is something you should be willing to die for...but I'd bet that a food-grade colouring agent sold in grocery stores might work to dye the water some colour that might work for that purpose.
I think there might be a chance that the food dye would discolour or stain the silicone seams, the same way that methylene blue can do. If you go ahead with this, I'd suggest a large-volume water change immediately after your experiment.